Change Log ============ Version 0.13.0 2023/07/21 ---------------------------- Since publication, I made a few minor bug fixes based on the feedback, including: * Windows user's feedback on path delimiter difference * some newly added argument in preprocessing module main functionalities remain intact, but the update will help the wide usage for other convenient functions Version 0.12.0 2022/09/13 ---------------------------- * Adding sctriangulate.spatial module * Adding different mode for computing annotation importance including ranking-based method * Adding elo_rating for computing the overall quality score for each annotation * Adding logger module for proper and clean logging * streamlined the API to make it easy to understand and run, no need to dig into low-level implementation * flexibly adding new metrics and callable * Allowing specifying number of cores to use * Allowing easily output stability scores * fix bugs in the code and doc Version 0.10.1 2022/01/07 ---------------------------- 1. ``Feature Enhancement``: * Neighborhood Components Analysis (supervised PCA embedding) * Coexpression plot * Sankey plot * Now supports for single-cell splicing data and single-cell mutation data multimodal analysis * Can visualize as many as 433 single cell clusters * color module support colorful stdout 2. polish the documentation and fix bugs Version 0.9.2 2021/10/23 --------------------------- 1. ``Feature Enhancement`` Add Build_custom_continous_cmap() and Build_custom_divergent_cmap() function 2. Polish the documentation and fix and typos Version 0.9.1 2021/10/10 ------------------------- 1. Add the option for whether assessing the raw cluster or not. 2. Polish the documentation and fix some typos Version 0.9.0 2021/10/05 -------------------------- 1. First public version.